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etap [2015/06/17 16:10]
meesters
etap [2017/06/11 04:47]
meesters
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 ====== EtapFS ====== ====== EtapFS ======
  
-When using etapfs you should acess these filesystem only within your job and not indicate paths on the command line with LSF commands (e.g. bsub). Especially ''​stdout''​ should not be directed to ''/​etapfs''​ as this can prevent a job to be ended (even if the wall clock time limit is hit), if one such filesystem "​hangs"​.+When using etapfs you should acess these filesystem only within your job and not indicate paths on the command line with SLURM commands (e.g. ''​sbatch''​). Especially ''​stdout''​ should not be directed to ''/​etapfs''​ as this can prevent a job to be ended (even if the wall clock time limit is hit), if one such filesystem "​hangs"​.
  
-This means that the ''​-o'',​ ''​-e''​ and ''​-cwd''​ parameters of bsub should not point to etapfs. However, copying within your script to etapfs is ok, e.g.:+This means that the ''​-o'',​ ''​-e''​ and ''​-D/​--workdir=<​path>​''​ parameters of ''​sbatch'' ​should not point to etapfs. However, copying within your script to etapfs is ok, e.g.:
  
 <code bash> <code bash>
etap.txt · Last modified: 2017/06/30 08:38 by meesters