software:pyrad

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software:pyrad [2021/09/14 15:04]
jrutte02 removed
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-====== pyRAD ====== 
  
-^  pyRAD  ^^ 
-^ Website: | http://dereneaton.com/software/pyrad/ | 
-^ Version: | 3.0.3 | 
-^ Modulefile: | ''software/bioinf/pyRAD/3.0.3'' | 
-^ Prerequisites: | ''Python/2.7.7'', \\ ''software/bioinf/vsearch'' / ''software/bioinf/usearch'', \\ ''software/bioinf/muscle'', \\ (''software/bioinf/PEAR'') | 
- 
-===== Notes ===== 
- 
-You don't really need to load the modulefiles for the other bioinf packages if you specify the full path to them in lines 4 and 5 in ''params.txt'': 
- 
-<file text params.txt> 
-[...] 
-/cluster/Apps/bioinf/vsearch/1.1.1/vsearch    ## 4. command (or path) to call vsearch (or usearch)    (s3,s6) 
-/cluster/Apps/bioinf/muscle/3.8.31_i86/muscle ## 5. command (or path) to call muscle                  (s3,s7) 
-[...] 
-</file>