software:topical:lifescience:qa

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Quality Assessment of NGS Data

Checking the quality1) of experimental data is crucial to data analysis.

One of the best known tools for estimating the sequencing quality (and providing summary statistics and plots) is FastQC.

We provide this software as modules under:

bio/FastQC

You can find a wrapper to ease your workflow, below.

We provide a wrapper module on Mogon in order to aggregate jobs and to integrate the quality check

This page is under construction.


1)
Quality checks or assessments are different to quality control.
  • software/topical/lifescience/qa.1546947103.txt.gz
  • Last modified: 2019/01/08 12:31
  • by meesters