software:topical:lifescience:qa

This is an old revision of the document!


Quality Assessment of NGS Data

Checking the quality1) of experimental data is crucial to data analysis.

One of the best-known tools for estimating the sequencing quality (and providing summary statistics and plots) is FastQC.

We provide this software as modules under:

bio/FastQC

You can find a wrapper to ease your workflow, below.

We provide a wrapper module on Mogon in order to aggregate jobs and to integrate the quality check

This page is under construction.


1)
Quality checks or assessments are different to quality control.
  • software/topical/lifescience/qa.1546947185.txt.gz
  • Last modified: 2019/01/08 12:33
  • by meesters