software:topical:lifescience:qa

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software:topical:lifescience:qa [2019/01/08 13:49]
meesters [The Wrapper Module on Mogon]
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-====== Quality Assessment of NGS Data ====== 
  
-Checking the quality((Quality checks or assessments are different to quality control.)) of experimental data is crucial to data analysis. 
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-===== Software Options ===== 
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-==== FastQC ==== 
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-One of the best-known tools for estimating the sequencing quality (and providing summary statistics and plots) is [[https://www.bioinformatics.babraham.ac.uk/projects/fastqc/|FastQC]]. 
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-We provide this software as [[:setting_up_environment_modules|modules]] under: 
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-''bio/FastQC'' 
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-You can find a wrapper to ease your workflow, [[software:topical:lifescience:qa#the_wrapper_module_on_mogon|below]]. 
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-===== The Wrapper Module on Mogon ===== 
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-We provide a wrapper module on Mogon in order to aggregate jobs and to integrate the quality check into a workflow. 
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-The wrapper script is available as a module 
  • software/topical/lifescience/qa.1546951750.txt.gz
  • Last modified: 2019/01/08 13:49
  • by meesters