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software:topical:lifescience:transcript_abundance_tools

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software:topical:lifescience:transcript_abundance_tools [2019/11/08 12:37]
meesters created
software:topical:lifescience:transcript_abundance_tools [2019/11/08 12:41]
meesters [sleuth]
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 ===== kallisto ===== ===== kallisto =====
  
 +[[http://​pachterlab.github.io/​kallisto/​|kallisto]] quantifies abundances of transcripts from RNA-Seq data, or more other target sequences using high-throughput sequencing reads. Modules on Mogon can be found as((loading a module without version specification will load the most recent one)):
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 +''​bio/​kallisto''​
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 +
 +
 + 
 ===== sleuth ===== ===== sleuth =====
  
 +[[http://​pachterlab.github.io/​sleuth|sleuth]] investigates RNA-Seq transcript abundance from kallisto and perform differential expression analysis. Modules on Mogon can be found as:
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 +''​bio/​sleuth''​
software/topical/lifescience/transcript_abundance_tools.txt · Last modified: 2019/11/08 12:41 by meesters