software:topical:r_bioconductor

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software:topical:r_bioconductor [2019/11/15 09:38]
meesters created
software:topical:r_bioconductor [2019/11/15 09:47]
meesters removed
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 Please consider the [[development:scripting_languages:r|general notes on R]]. Please consider the [[development:scripting_languages:r|general notes on R]].
 +
 +===== Installed Libraries =====
 +
 +The number of installed libraries will vary over time. To see the installed Bioconductor libraries of a particular module, start up R and inquire with:
 +
 +<code Rsplus>
 +library(sessioninfo)
 +library(dplyr)
 +
 +# list all installed packages
 +pkgs <- installed.packages()[,'Package']
 +
 +## combine and filter for BioC only
 +bioc_pkgs <- tibble(pkgs, source) %>% filter(source == "Bioconductor")
 +options(tibble.print_max = Inf)
 +bioc_pkgs
 +</code>