News from our group and our “mogon ticker” with software / work related news can be found at our webpage. The easiest way to get informed about our news is to subscribe to our rss-feed.

• Courses
• HPC-Workshop
• Getting Support
• FAQ

The regulations for use of the data center (ZDV) apply at all times. Further Policies are listed per item:

• Login-Nodes
• Home directory
• Accounts & Accounting
• Conducting courses on Mogon I or II
• For software install requests, please answer the questions of our form.

• How to access the mogon clusters I & II
• Compute nodes with technical description

• Submit jobs on Mogon
• General Notes on Partitions (a.k.a. batch queues)
• Manage and monitor jobs, pending reasons, information on job failures
• Memory reservation
• Managing I/O issues:
  • Node local scratch
  • Ramdisk reservation
  • Special/Dedicated File Systems:
    • EtapFS
    • I/O bandwidth reservation (ATLAS)
• Workflow Organization:
  • Setting up the environment (Modules)
  • Job Dependency
  • Job Arrays
  • Script Based Parallelisation (a.k.a Node-local scheduling)
  • Checkpoint Restarting
• Using Accelerators:
  • Using GPU Nodes
• Evaluation
  • Evaluation of Jobs
  • Evaluate Accounting Status

• Filesystems Overview
  • Data Transfer Options
  • Quotas
  • Backup (currently only for Mogon I)
• Archiving Data
  • Preparation Steps prior to Archiving
  • Archiving Data with TSM

Here you will find information about specific software installed on Mogon along with several usage instructions. More information on how we build software and how to request installations can be found under this link. However, the direct link for install requests is here.

• Life Sciences
• Physical Simulation and Analytics Software

• JAVA
• MATLAB
• Mathematica
• Perl
• Python
  • Your Personal Environment (Additional Packages)
  • Job Submission
  • Performance Hints
• R
• Shells (with a focus on Bash)

• MPI
• Paraview
• Apache Spark

• LHC Grid documentation

• Scalasca http://www.scalasca.org/
• OpenSpeedShop http://www.openspeedshop.org/wp/ (further information soon)
• Profiling
• Debugging
• Optimization
  • Vectorization with regard to GCC

• Ganglia
  • Official Ganglia web page
  • MOGON ganglia monitoring report
  • Specific parameters and monitoring for MOGON
• Shell Based Monitoring

• Editors

When preparing a journal publication please reference Mogon. We prepared a basic acknowledgement.