Show pageOld revisionsBack to top This page is read only. You can view the source, but not change it. Ask your administrator if you think this is wrong. ====== Assesing Transscript Abundance ====== ====== Software Options ====== ===== kallisto ===== [[http://pachterlab.github.io/kallisto/|kallisto]] quantifies abundances of transcripts from RNA-Seq data, or more other target sequences using high-throughput sequencing reads. Modules on Mogon can be found as((loading a module without version specification will load the most recent one)): ''bio/kallisto'' ===== sleuth ===== [[http://pachterlab.github.io/sleuth|sleuth]] investigates RNA-Seq transcript abundance from kallisto and perform differential expression analysis. Modules on Mogon can be found as: ''bio/sleuth'' start/software/topical/lifesciences/ngs/transcript_abundance_tools.txt Last modified: 2021/05/09 22:17by meesters