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start [2019/08/15 08:07]
meesters [Filesystems and Data Handling beyond Compute Jobs]
start [2019/10/18 11:44] (current)
meesters [Development on the JGU HPC System(s)]
Line 45: Line 45:
     * [[job_dependeny|Job Dependency]]     * [[job_dependeny|Job Dependency]]
     * [[job_arrays|Job Arrays]]     * [[job_arrays|Job Arrays]]
-    * [[node_local_scheduling|Script Based Parallelisation (a.k.a Node-local scheduling)]] +    * [[node_local_scheduling|Script Based Parallelization]]  
 +    * [[spark|Apache Spark]]
     * [[checkpoint_restart|Checkpoint Restarting]]     * [[checkpoint_restart|Checkpoint Restarting]]
   * Using Accelerators:​   * Using Accelerators:​
Line 63: Line 64:
     * [[archiving:​preparation|Preparation Steps prior to Archiving]]     * [[archiving:​preparation|Preparation Steps prior to Archiving]]
     * [[archiving:​tsm|Archiving Data with TSM]]      * [[archiving:​tsm|Archiving Data with TSM]] 
-  ​* [[data_management:​irods|Data Management with iRODS]]+    ​* [[data_management:​irods|Data Management with iRODS]]
  
  
Line 77: Line 78:
   * [[software:​topical:​physics|Physical Simulation and Analytics Software]]   * [[software:​topical:​physics|Physical Simulation and Analytics Software]]
  
-==== Scripting Languages ​====+==== Visualization ​==== 
 + 
 +    * [[visualize_queue:​paraview|Paraview]]
  
-  * [[java|JAVA]] 
-  * [[software:​matlab|MATLAB]] 
-  * [[software:​mathematica|Mathematica]] 
-  * [[software:​perl|Perl]] 
-  * [[software:​python|Python]] ​ 
-    * [[software:​python#​Your_Personal_Environment_(Additional_Packages)|Your Personal Environment (Additional Packages)]] 
-    * [[software:​python#​job_submission|Job Submission]] 
-    * [[software:​python#​performance_hints|Performance Hints]] 
-  * [[software:​R|R]] 
-  * [[software:​Shell|Shells (with a focus on Bash)]] 
  
-=== Odds and Ends ==== 
  
-    * [[mpi|MPI]] 
-    * [[visualize_queue:​paraview|Paraview]] 
-    * [[spark|Apache Spark]] 
  
-==== ATLAS specific usage ====+===== Development on the JGU HPC System(s) =====
  
-  * [[lhcgrid|LHC Grid documentation]]+The JGU HPC group supports all kind of HPC development efforts on its systems. For this we provide a variety of tools and services:
  
-==== Development Tools ====+  * [[development|Overview on Development Tools and Services]] (from Editors over Monitoring to Debugging Tools) 
 +  * shortcut -> [[development:​scripting_languages|Scripting Languages]]
  
  
-=== Performance Analysis Tools and Optimization Tools / Aspects === 
  
-  * Scalasca [[http://​www.scalasca.org/​]] 
-  * OpenSpeedShop ​ [[http://​www.openspeedshop.org/​wp/​]] (further information soon) 
-  * [[profiling|Profiling]] 
-  * [[debugging|Debugging]] 
-  * [[unittests|Unit Testing]] 
  
  
-==== Monitoring Systems ==== 
  
-  * [[Ganglia]] 
-    * [[http://​ganglia.sourceforge.net|Official Ganglia web page]] 
-    * [[http://​m2monitor.zdv.uni-mainz.de/​ganglia|MOGON ganglia monitoring report]] 
-    * [[Specific parameter and monitoring for MOGON|Specific parameters and monitoring for MOGON]] 
-  * [[Shell Based Monitoring]] 
  
-==== Editors / IDEs ==== 
  
-  * [[Editors]] 
-  * [[IDEs]] 
     ​     ​
 ===== How to acknowledge Mogon ===== ===== How to acknowledge Mogon =====
start.1565849241.txt.gz · Last modified: 2019/08/15 08:07 by meesters